PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHM99167.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 218aa    MW: 24469.2 Da    PI: 9.9433
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHM99167.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.6e-133277454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h e+Er+RR+++N++f  Lr ++P+       K++Ka+ L  A+ YI++L
  KHM99167.1 32 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 77
                799***********************6.....5****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088817.392877IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.94E-193197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.53E-113181No hitNo description
Gene3DG3DSA:4.10.280.106.1E-193297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-113277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-153483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MVKQADSRVM EPEKRPRKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK  60
MDKASLLGDA ISYINELKLK LNGLDSEKGE LEKQLDSAKK ELELATKNPP PPPPPPPGLP  120
PSNNEEAKKT TTKLADLEIE VKIIGWDAMI RIQCSKKNHP AARLMAALKD LDLEVHHASV  180
SVVNDLMIQQ ATVNMGNKFY TQEQLLSALS SKVGDEQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11321KRPRKRGRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003516794.11e-155PREDICTED: transcription factor MYC2-like
SwissprotO496871e-90MYC4_ARATH; Transcription factor MYC4
TrEMBLA0A0B2NVA11e-159A0A0B2NVA1_GLYSO; Transcription factor MYC4
TrEMBLI1J6C61e-155I1J6C6_SOYBN; Uncharacterized protein
STRINGGLYMA01G12740.11e-154(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29383364
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17880.12e-80bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]